dr n. chem. Tomasz Woźniak - Institute of Human Genetics Polish Academy of Sciences

Bioinformatician

I perform analysis of various data including next-generation sequencing data and statistical analyses. Development of scientific software, scientific databases and science-supporting software is also significant part of my activity. Moreover I’m giving programing workshops and vector-graphic workshops for Institute workers and I’m one of the AIM team members.
Databases and tools:
tpsic.igcz.poznan.pl

Publications

CRISPR/Cas9 screen for genome-wide interrogation of essential MYC-bound E-boxes in cancer cells.

Kazimierska M, Podralska M, Żurawek M, Woźniak T, Kasprzyk ME, Sura W, Łosiewski W, Ziółkowska-Suchanek I, Kluiver J, van den Berg A, Rozwadowska N, Dzikiewicz-Krawczyk A

Molec Oncol, Epub 2023 Nov, 17 (11): 2295-2213, doi: 10.1002/1878-0261.13493, Epub Aug 7

IF-6.6 MNiSW-140

TransCRISPR – sgRNA design tool for CRISPR/Cas9 experiments targeting DNA sequence motifs A.

Woźniak T, Sura W, Kazimierska M, Kasprzyk ME, Podralska M, Dzikiewicz-Krawczyk A.

Nucleic Acids Res, 2023 Jul 5 (W1): W577-W586. doi: 10.1093/nar/gkad355 Eub May 9

IF-14.9 MNiSW-200

In vivo secondary structural analysis of Influenza A virus genomic RNA.

Mirska B, Woźniak T, Lorent D, Ruszkowska A, Peterson JM, Moss WN, Mathews DH, Kierzek R, Kierzek E

Cell Mol Life Sci, 2023 May 2; 80 (5):136, 24 str., . doi: 10.1007/s00018-023-04764-1

IF-8.0 MNiSW-140

SINBAD, structural, experimental, clinical characterization of STAT inhibitors and their potential applications.

Plens-Gałąska M, Woźniak T, Wesoły J and Bluyssen HAR

Scientific Data,.2022 Mar 31, 9, article No 139, 6 str, doi. 10.1038/s41597-022-01243-3

IF-6,444 MNiSW-140

A new molecular mechanism of RNA circularization and the microRNA sponge formation.

Belter A, Popenda M, Sajek M, Woźniak T, Naskręt-Barciszewska MZ, Szachniuk M, Jurga S & Barciszewski J

J Biomolec Struct Dynamics, 2022, 40 (7):3038-3045, Epub 2020 Nov 17, doi: 10.1080/07391102.2020.1844802

IF-3,39 MNiSW-70

Human live spermatozoa morphology assessment using digital holographic microscopy.

Kamieniczna M, Stachowska E, Augustynowicz A, Wożniak T, Kurpisz MK

Scientific Reports, 2022, 12, Art No 4846, 13 stron, doi./10.1038/s41598-022-08798-6

IF-4,380 MNiSW-140

RNAlign2D – a rapid method for combined RNA structure and sequence-based alignment using a pseudo-amino acid substitution matrix.

Woźniak T, Sajek M, Jaruzelska J, Sajek MP

BMC Bioinformatics, 2021, 22, e504, 17 stron, doi: 10.1186/s2859-021-04426-8

IF-3,169 MNiSW-100

Beta-defensin 1 gene polymorphisms in the pathologies of the oral cavity-Data from meta-analysis: Association only with rs1047031 not with rs1800972, rs1799946, and rs11362.

Ślebioda Z, Woźnia T, Dorocka-Bobkowska B, Woźniewicz M, Kowalska A

J Oral Pathology Med, 2021 Jan, 50 (1): 22-31, Epub 2020 Nov 24, doi.10.1111/jop.13136

IF-2,495 MNiSW-100

How much, if anything, do we know about sperm chromosomes of Robertsonian translocation carriers?

Wiland E, Olszewska M, Woźniak T, Kurpisz M

Cell Mol Life Sci, 2020, 77(23): 47-65-4785, Epub 2020 Jun 8, doi: 10.1007/s00018-020-03560-5

IF-6,496 MNiSW-140

Seminal Plasma Analysis of Oxidative Stress in Di_erent Genitourinary Topographical Regions Involved in Reproductive Tract Disorders Associated with Genital Heat Stress.

Frączek M, Wojnar Ł, Kamieniczna M, Piasecka M, Gill K, Kups M, Chopyak V, Havrylyuk A, Nakonechnyy J, Nakonechnyy A, Wozniak T and Kurpisz M

Int J Molec Sci, 2020, 21 (17) e6427, 17 str, doi:10.3390/ijms21176427

IF-4,556 MNiSW-140

Publications

All publications